Tracklist
- 1Title Screen
- 1Title2:06
- 1タイトル（大海原）2:11
- 2File Select1:06
- 2メニューセレクト1:07
- 2File Selection
- 3紙芝居（はじまり）0:34
- 3Prologue - Tetra And Her Handsome Pirates0:33
- 3Intro
- 4紙芝居（出会い）0:19
- 4Prologue - A Young Boy Dressed In Green0:18
- 4The Ghost Ship
- 5Mercay Island
- 5Prologue - A Beautiful Princess0:17
- 5紙芝居（ゼルダ姫）0:17
- 6Prologue - The Evil King0:35
- 6紙芝居（魔王のたくらみ）0:36
- 6Overworld
- 7紙芝居（勇者となった少年）0:34
- 7Oshus
- 7Prologue - A True Hero0:33
- 8Prologue - A Happy Pirate Ending!0:20
- 8Caves
- 8紙芝居（旅立ち）0:21
- 9Linebeck
- 9海賊船2:58
- 9Tetra's Pirates2:48
- 10The Ghost Ship Appears1:24
- 10幽霊船 出現1:44
- 10Inside a House
- 11テトラの呼び声1:04
- 11At Sea
- 11Tetra Boards The Ghost Ship0:27
- 12メルカ島（南部）1:42
- 12Link... Save Me...0:59
- 12Beedle’s Shop
- 13Mercay Island1:36
- 13家の中1:37
- 13Enemy
- 14シーワンのテーマ2:14
- 14House1:32
- 14Dungeons
- 15Pirates’ Theme
- 15Oshus's Theme2:08
- 15シーワンの剣術指南1:48
- 16小アイテムゲット0:02
- 16Small Item Get0:02
- 16Ciela
- 17洞窟内部0:55
- 17Mysterious Cave0:26
- 17Fortune Teller
- 18Danger! Monsters Ahead!1:35
- 18The Phantom Hourglass
- 18ラインバックのテーマ1:26
- 19Spotted!
- 19Item Get0:02
- 19アイテムゲット（目が回る）0:03
- 20Boss
- 20Sword Training - Targeted Attack0:39
- 20占いの館2:51
- 21夢幻の砂時計ゲット0:05
- 21Sword Training A1:06
- 21Bellum’s Story
- 22Jolene
- 22Sword Training B1:06
- 22海王の神殿 探索開始0:05
- 23迫り来るファントム1:27
- 23Battle With Jolene
- 23Sword Training C1:06
- 24Targeted Attack Perfected1:08
- 24ファントムの一撃0:02
- 24Goron Village
- 25テリーショップ2:28
- 25Inside a Goron’s House
- 25Sword Training - Side Slash0:39
- 26Monsters of the Sea
- 26精霊のみなもとゲット0:03
- 26Sword Training D1:06
- 27Bellum
- 27幽霊船 接近0:33
- 27Side Slash Perfected1:08
- 28Sword Training - Spin Attack0:39
- 28神殿内部2:19
- 28Game Over
- 29Last Battle – Phantom Bellum
- 29戦闘2:30
- 29Sword Training E1:06
- 30アイテムゲット0:03
- 30Intro – Zelda Main Theme
- 30Spin Attack Perfected1:10
- 31Dungeon2:17
- 31Wi-Fi Battle
- 31ボス戦2:59
- 32時の砂 出現1:19
- 32Wi-Fi Credits
- 32Nothing Get0:01
- 33時の砂ゲット0:04
- 33Linebeck's Theme1:25
- 34Item Get (Dizzy)0:02
- 34精霊開放1:21
- 35Linebeck's Theme (No Intro)1:22
- 35精霊救出0:11
- 36ハートの器ゲット0:04
- 36Ocean2:08
- 37Beedle's Shop Ship2:23
- 37メルカ島（北部）1:40
- 38Astrid's House2:44
- 38大砲ゲーム 説明1:44
- 39海上ボス2:27
- 39Battle2:24
- 40ゲームオーバー0:13
- 40Fortune Telling0:20
- 41Boss Battle2:54
- 41精霊救出？0:05
- 42シーワンとの会話2:22
- 42Spirit Freed1:27
- 43Spirit Joins0:10
- 43シエラの覚醒1:26
- 44ジョリーン襲来0:49
- 44Heart Container Get0:03
- 45Spirit Gem Get0:03
- 45霧の海域3:54
- 46テトラ発見0:04
- 46Phantom Hourglass Get0:04
- 47紙芝居（ベラムー）2:33
- 47The Phantom Hourglass Tips0:05
- 48リンクとテトラ0:08
- 48Phantoms In Pursuit1:21
- 49新たな出航0:12
- 49A Fatal Mistake0:02
- 50大金ルピーゲット0:04
- 50Game Over0:12
- 51ゴロン島2:45
- 51The Ghost Ship1:12
- 52Navigating The Fog2:02
- 52ゴロン島 家の中2:49
- 53ババルピーゲット0:03
- 53Sand of Hours1:13
- 54マジカルボックス0:14
- 54Sand of Hours Get0:04
- 55Salvatore's Cannon Game1:36
- 55アイテムゲット？0:02
- 56Salvage Catch0:01
- 56夢幻のつるぎゲット0:11
- 57ベラムー戦3:46
- 57Miss!0:03
- 58Maritime Battle2:22
- 58ベラムー戦（取り戻した記憶）0:53
- 59Spirit Of Courage Get0:04
- 59テトラ復活0:11
- 60Oshus's Story2:21
- 60テトラとの再会1:39
- 61テトラ誘拐0:18
- 61Ciela, The Spirit of Courage1:20
- 62The She-Pirate, Jolene0:43
- 62生きていたベラムー2:18
- 63Rupoor Get0:02
- 63ベラムー戦（幽霊船）2:36
- 64しぶといベラムー0:08
- 64Tetra Discovered0:03
- 65捕らわれたラインバック0:38
- 65The Life Leech, Bellum2:33
- 66とりつかれたラインバック0:29
- 66Tetra...0:07
- 67ベラムー戦（ファントム）2:40
- 67Linebeck Leaps Into Action0:12
- 68Freedle's Song0:13
- 68海王登場0:08
- 69The She-Pirate, Jolene (No Intro)0:41
- 69海王との会話2:24
- 70Goron Island2:40
- 70最後の会話2:17
- 71シエラとの別れ0:11
- 71Goron House2:43
- 72スタッフクレジット3:51
- 72Question Two Correct0:01
- 73Question Three Correct0:01
- 73エピローグ0:34
- 74Question Four Correct0:01
- 74通信対戦：開始0:03
- 75Question Five Correct0:01
- 75通信対戦：リンク操作1:57
- 76Drum Roll0:12
- 76通信対戦：ファントムに倒された0:04
- 77通信対戦：リンクを倒した0:04
- 77Goron Initiation Success0:04
- 78通信対戦：勝利0:04
- 78Big Gold Rupee Get0:03
- 79通信対戦：敗北/引き分け0:05
- 79Oshus's Story (No Intro)2:15
- 80Phantom Sword Get0:11
- 80通信対戦：結果0:47
- 81Bellum Battle3:40
- 82Ciela's Memory Released0:47
- 83Bellum Battle (No Intro)3:24
- 84Time Stopped0:32
- 85Tetra Restored0:11
- 86Tetra's Theme1:33
- 87A Happy Ending Postponed0:18
- 88Bellum's Theme2:19
- 89Ghost Ship Battle2:30
- 90Bellum's Theme (Intro - Grandpa!)2:28
- 91Wake Up, Link!0:29
- 92Linebeck's Struggle0:39
- 93Linebeck Possessed0:05
- 94Phantom Linebeck Battle2:38
- 95The Ocean King0:07
- 96Ocean King's Theme2:23
- 97Ciela's Parting Words2:16
- 98Good-Bye0:10
- 99Staff Roll3:46
- 100The End0:32
- 101Multiplayer - Turn Start0:03
- 102Multiplayer - Battle Mode (Link)1:55
- 103Multiplayer - Link Felled0:03
- 104Multiplayer - Opponent Link Felled0:03
- 105Multiplayer - Win0:04
- 106Multiplayer - Lose (Or Draw)0:04
- 107Multiplayer - Results1:14
- 108Multiplayer - Stage Select (Salvatore's Cannon Game Double)1:36
- 109Goron Quiz Fail (Miss! Double)0:03
- 110Minigame (Sword Training A Double)1:06
- 111Targeted Attack Perfected (Unused Tiny Version)0:04
- 112Miss! Double 20:03
- 113Freedle - Guitar Strum 10:02
- 114Freedle - Guitar Strum 20:02
- 115Freedle - Guitar Strum 30:02
- 116Freedle - Guitar Strum 40:02
- 117Freedle - Guitar Strum 50:02
- 118Freedle - Guitar Strum 60:02
- 119Freedle - Guitar Strum 70:02
- 120Freedle - Guitar Strum 80:02
- 121Freedle - Guitar Strum 90:02